Applications & Publications

Technical Notes (1)
Publications (13)

Technical Notes

D. rerio Analysis and Sorting: High throughput screening of innate immune responses in zebrafish embryos

Profiling of live D. reriolarvae using the COPAS XL instrument.  Work performed in collaboration with the Spaink Laboratory, University of Leiden (ANXL-02)


Publications

m6A-mRNA Reader YTHDF2 Identified as a Potential Risk Gene in Autism With Disproportionate Megalencephaly

Nishizaki et al.
January 30, 2025
https://doi.org/10.1002/aur.3314

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Burn pit-related smoke causes developmental and behavioral toxicity in zebrafish: Influence of material type and emissions chemistry

Smoot et al.
April 14, 2024
Heliyon. 2024 Apr 30; 10(8): e29675. Published online 2024 Apr 14. doi: 10.1016/j.heliyon.2024.e29675

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Adaptive Optics in an Oblique Plane Microscope

McFadden et al.
March 22, 2024
Version 1. bioRxiv. Preprint. 2024 Mar 22. doi: 10.1101/2024.03.21.586191Published in: Biomed Opt Express. 2024 Aug 1; 15(8): 4498–4512.

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Single-Cell Analysis of Rohon-Beard Neurons Implicates Fgf Signaling in Axon Maintenance and Cell Survival

Tuttle et al.
February 29, 2024
J Neurosci. 2024 Apr 17; 44(16): e1600232024. Prepublished online 2024 Feb 29. doi: 10.1523/JNEUROSCI.1600-23.2024

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A retroviral link to vertebrate myelination through retrotransposon-RNA-mediated control of myelin gene expression

Ghosh et al.
February 15, 2024
Cell, Volume 187, Issue 4p814-830.e23,February 15, 2024

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Macrophage mediated mesoscale brain mechanical homeostasis mechanically imaged via optical tweezers and Brillouin microscopy in vivo

So et al.
December 27, 2023
Version 2. bioRxiv. Preprint. 2023 Dec 27 [revised 2024 Mar 6]. doi: 10.1101/2023.12.27.573380

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Analysis of vascular disruption in zebrafish embryos as an endpoint to predict developmental toxicity

Nöth et al.
December 21, 2023
Reproductive Toxicology, Open access, Published: 21 December 2023, Volume 98, pages 537–549, (2024)

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A mechanistic understanding of the effects of polyethylene terephthalate nanoplastics in the zebrafish (Danio rerio) embryo

Bashirova et al.
February 02, 2023
Sci Rep. 2023; 13: 1891. Published online 2023 Feb 2. doi: 10.1038/s41598-023-28712-y

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Grouping of chemicals into mode of action classes by automated effect pattern analysis using the zebrafish embryo toxicity test

Teixidó et al.
March 07, 2022
Reproductive Toxicology, Open Access, Volume 96, pages 1353–1369, Published: 07 March 2022

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Morphometric analysis of developing zebrafish embryos allow predicting teratogenicity modes of action in higher vertebrates

Jarque et al.
August 19, 2020
Reproductive Toxicology 96 (2020) 337-348; https://doi.org/10.1016/j.reprotox.2020.08.004

An automated screening method for detecting compounds with goitrogenic activity using transgenic zebrafish embryos’

Jarque et al.
August 29, 2018
PLOS ONE | https://doi.org/10.1371/journal.pone.0203087 August 29, 2018

Semi-automated detection of goitrogenic compounds using transgenic zebrafish embryos and the VAST BioImager platform

SETAC Europe 25th Annual Meeting
Sergio Jarque¹, Eva Fetter², Marek Pípal¹, Marie Smutná¹, Ludek Blaha¹, Stefan Scholz².
May 03, 2015

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Robotic injection of zebrafish embryos for high-throughput screening in disease models

Herman P. Spainka, Chao Cuib, Malgorzata I. Wiwegera, b, Hans J. Jansenb, Wouter J. Venemana, Rubén Marín-Juezb, Jan de Sonnevillec, Anita Ordasa, Vincenzo Torracaa, Wietske van der Enta, William P. Leendersd, Annemarie H. Meijer,a, B. Ewa Snaar-Jagalskaa, Ron P. Dirksb,
August 15, 2013
Volume 62, Issue 3, 15 August 2013, Methods 62: 246–254

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